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?Apogonichthys adspersus Castelnau, 1878
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Apogonichthys ahimsa
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?A. a. santoensis Whitley, 1959
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?Apogonichthys landoni Herre, 1934
- Apogonichthys landoni; [CoL]
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?Apogonichthys macrophthalmus Bleeker (ex Castelnau), 1859-60
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?Apogonichthys melampodus Blosser, 1909
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Apogonichthys melanopterus
- Amia melas Fowler, 1918; (2 homonym)
- Apogonichthys melanopterus Fowler & Bean, 1930; (replacement)
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Apogonichthys mentalis Evermann & Seale, 1907
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?Apogonichthys nafae Snyder, 1909
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?Apogonichthys nebulosus Ogilby, 1908
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?Apogonichthys nudus Regan, 1905
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Apogonichthys ocellatus Hayashi, 1984
- Apogon ocellatus Weber, 1913; (valid as)
- Apogonichthys ahimsa Whitley, 1959; (synonym)
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Apogonichthys perdix Bleeker, 1854
- Apogon infuscus Fourmanoir, 1955; (synonym)
- Apogonichthys infuscus Fourmanoir, 1955; (synonym)
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?Apogonichthys polystigma Bleeker, 1854
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?Apogonichthys strombi Plate, 1908
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?Apogonichthys taeniopterus Bleeker (ex Castelnau), 1859-60
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Apogonichthys waikiki Jordan & Evermann, 1903