Source Name	Material Type	Term Source REF	Characteristics [Genotype]	Characteristics[Organism]	Term Source REF	Characteristics[BioSourceType]	Term Source REF	Characteristics[CellType]	Term Source REF	Characteristics[CellLine]	Protocol REF	Parameter Value [media]	Sample Name	Protocol REF	Parameter Value [Input RNA]	Unit [MassUnit]	Term Source REF	Parameter Value [Extracted Product]	Term Source REF	Parameter Value [Amplification]	Extract Name	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF:Affymetrix:Protocol:	Hybridization Name	Array Design REF	Term Source REF	Protocol REF:Affymetrix:Protocol:	Scan Name	Array Data File	Comment[EXP]	Protocol REF	Normalization Name	Derived Array Data File	Factor Value [EF1](genotype)	Normalization Name	Derived Array Data Matrix File	Comment[CDF]
TK6 replicate 1	cell	MO	wild_type	Homo sapiens	ncbitax	fresh_sample	MO	B_lymphoblast	CTO	TK6	GROWTHPRTCL10653	RPMI 1640 medium supplemented with 10% horse serum	TK6 replicate 1	EXTPRTCL10654	5	ug	MO	total RNA	MO	none	TK6 replicate 1	P-AFFY-2	ArrayExpress	TK6 replicate 1	biotin		H_TK6 replicate 1	A-AFFY-44	ArrayExpress		TK6 replicate 1	Data1.CEL	Data1.EXP		TK6 replicate 1	Data1.CHP	wild_type	combined data	affy_dm.txt	HG-U133A_Plus_2.CDF
TK6 replicate 2	cell	MO	wild_type	Homo sapiens	ncbitax	fresh_sample	MO	B_lymphoblast	CTO	TK6	GROWTHPRTCL10653	RPMI 1640 medium supplemented with 10% horse serum	TK6 replicate 2	EXTPRTCL10654	5	ug	MO	total RNA	MO	none	TK6 replicate 2	P-AFFY-2	ArrayExpress	TK6 replicate 2	biotin		H_TK6 replicate 2	A-AFFY-44	ArrayExpress		TK6 replicate 2	Data2.CEL	Data2.EXP		TK6 replicate 2	Data2.CHP	wild_type	combined data	affy_dm.txt	HG-U133A_Plus_2.CDF
TK6MDR1 replicate 1	cell	MO	SF91m3 oncoretrovirus	Homo sapiens	ncbitax	fresh_sample	MO	B_lymphoblast	CTO	TK6	GROWTHPRTCL10653	RPMI 1640 medium supplemented with 10% horse serum	TK6MDR1 replicate 1	EXTPRTCL10654	5	mg	MO	total RNA	MO	none	TK6MDR1 replicate 1	P-AFFY-2	ArrayExpress	TK6MDR1 replicate 1	biotin	Hybridization-EukGE-WS2v5	H_TK6MDR1 replicate 1	A-AFFY-44	ArrayExpress	Scan	TK6MDR1 replicate 1	Data3.CEL	Data3.EXP	TRANPRTCL10656	TK6MDR1 replicate 1	Data3.CHP	SF91m3 oncoretrovirus	combined data	affy_dm.txt	HG-U133A_Plus_2.CDF
TK6MDR1 replicate 2	cell	MO	SF91m3 oncoretrovirus	Homo sapiens	ncbitax	fresh_sample	MO	B_lymphoblast	CTO	TK6	GROWTHPRTCL10653	RPMI 1640 medium supplemented with 10% horse serum	TK6MDR1 replicate 2	EXTPRTCL10654	5	mg	MO	total RNA	MO	none	TK6MDR1 replicate 2	P-AFFY-2	ArrayExpress	TK6MDR1 replicate 2	biotin	Hybridization-EukGE-WS2v5	H_TK6MDR1 replicate 2	A-AFFY-44	ArrayExpress	Scan	TK6MDR1 replicate 2	Data4.CEL	Data4.EXP	TRANPRTCL10656	TK6MDR1 replicate 2	Data4.CHP	SF91m3 oncoretrovirus	combined data	affy_dm.txt	HG-U133A_Plus_2.CDF
